Monitoring inconclusive GBT validations and harvesting data for testing

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TBar
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Message 1813749 - Posted: 30 Aug 2016, 10:09:01 UTC - in response to Message 1813748.  
Last modified: 30 Aug 2016, 10:27:57 UTC

Pick one? OK, I choose this BLC2 that hasn't been run yet, http://setiathome.berkeley.edu/workunit.php?wuid=2249300998

Meanwhile here is the Non-SoG version. Which concurs with the Beta tests, the SoG version Doesn't work very well in Darwin 15.6. The Regular version is Much faster, but still gives Bad Results;

KWSN-Darwin-MBbench v2.1.07
Running on TomsMacPro.local at Tue Aug 30 09:54:12 2016
---------------------------------------------------
Starting benchmark run...
---------------------------------------------------
Listing wu-file(s) in /testWUs :
reference_work_unit_r3215.wu

Listing executable(s) in /APPS :
MBv8_8.17r3516_NV_ssse3_x86_64-apple-darwin

Listing executable in /REF_APPs :
MBv8_8.05r3344_sse41_x86_64-apple-darwin
---------------------------------------------------
Current WU: reference_work_unit_r3215.wu
---------------------------------------------------
Skipping default app MBv8_8.05r3344_sse41_x86_64-apple-darwin, displaying saved result(s)
Elapsed Time: ………………………………… 2110 seconds
---------------------------------------------------
Running app with command : MBv8_8.17r3516_NV_ssse3_x86_64-apple-darwin
      464.34 real        55.83 user       103.55 sys
Elapsed Time : ……………………………… 464 seconds
Speed compared to default : 454 %
-----------------
Comparing results
                ------------- R1:R2 ------------     ------------- R2:R1 ------------
                Exact  Super  Tight  Good    Bad     Exact  Super  Tight  Good    Bad
        Spike      0      9     11     13      0        0      9     11     13      0
     Autocorr      0      1      1      1      0        0      1      1      1      0
     Gaussian      0      0      0      1      5        0      0      0      1      5
        Pulse      0      0      0      0      0        0      0      0      0      2
      Triplet      0      1      1      2      0        0      1      1      2      1
   Best Spike      0      1      1      1      0        0      1      1      1      0
Best Autocorr      0      1      1      1      0        0      1      1      1      0
Best Gaussian      0      0      0      0      1        0      0      0      0      1
   Best Pulse      0      0      0      0      1        0      0      0      0      1
 Best Triplet      0      1      1      1      0        0      1      1      1      0
                ----   ----   ----   ----   ----     ----   ----   ----   ----   ----
                   0     14     16     20      7        0     14     16     20     10

Unmatched signal(s) in R1 at line(s) 499 526 580 607 634 694 720
Unmatched signal(s) in R2 at line(s) 482 509 526 569 595 649 676 703 763 789
For R1:R2 matched signals only, Q= 7.881%
Result      : Weakly similar.
---------------------------------------------------
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Message 1813767 - Posted: 30 Aug 2016, 12:09:04 UTC - in response to Message 1813748.  

I have archived another ~150 work units from both telescope sources. Feel free to download them and test. They are all located here, sorry for the folder structure of the drive, I'll try to make it tidier
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Message 1813786 - Posted: 30 Aug 2016, 13:19:29 UTC

Now for the GUPPI Results using this WU, http://setiathome.berkeley.edu/workunit.php?wuid=2249300998

First the CPU Results which are very close to the Host running the AMD Ellesmere;
Pulse: peak=0.8381211, time=45.82, period=0.846, d_freq=6222001021.41, score=1, chirp=-7.0343, fft_len=128 
Spike: peak=24.31262, time=85.9, d_freq=6222002174.11, chirp=9.9486, fft_len=128k
Spike: peak=24.83467, time=85.9, d_freq=6222002174.09, chirp=9.9524, fft_len=128k
Spike: peak=25.85841, time=85.9, d_freq=6222002174.11, chirp=9.9537, fft_len=128k
Spike: peak=24.77246, time=85.9, d_freq=6222002174.09, chirp=9.9575, fft_len=128k
Spike: peak=26.00912, time=85.9, d_freq=6222002174.11, chirp=9.9588, fft_len=128k
Spike: peak=24.69357, time=85.9, d_freq=6222002174.11, chirp=9.9638, fft_len=128k
Pulse: peak=0.7050482, time=45.82, period=0.6538, d_freq=6222006366.61, score=1.005, chirp=12.059, fft_len=128 
Pulse: peak=1.075337, time=45.84, period=1.293, d_freq=6222007930.82, score=1.032, chirp=28.139, fft_len=512 
Triplet: peak=10.15056, time=29.08, period=20.4, d_freq=6222009544.38, chirp=-31.404, fft_len=2k
Pulse: peak=1.037466, time=45.86, period=1.333, d_freq=6222004679.71, score=1.016, chirp=56.906, fft_len=1024 
Pulse: peak=2.533699, time=45.82, period=4.414, d_freq=6222006327.97, score=1.082, chirp=-66.829, fft_len=256 

Best spike: peak=26.00912, time=85.9, d_freq=6222002174.11, chirp=9.9588, fft_len=128k
Best autocorr: peak=16.60604, time=62.99, delay=3.1172, d_freq=6222004751.66, chirp=12.94, fft_len=128k
Best gaussian: peak=0, mean=0, ChiSq=0, time=-2.123e+11, d_freq=0,
	score=-12, null_hyp=0, chirp=0, fft_len=0 
Best pulse: peak=2.533699, time=45.82, period=4.414, d_freq=6222006327.97, score=1.082, chirp=-66.829, fft_len=256 
Best triplet: peak=10.15056, time=29.08, period=20.4, d_freq=6222009544.38, chirp=-31.404, fft_len=2k


The OpenCL task found;
Spike count:    6
Autocorr count: 0
Pulse count:    6
Triplet count:  1
Gaussian count: 0

TomsMacPro:KWSN-OSX-bench-MB_v2.1.07 Tom$ ./benchmark
KWSN-Darwin-MBbench v2.1.07
Running on TomsMacPro.local at Tue Aug 30 10:31:38 2016
---------------------------------------------------
Starting benchmark run...
---------------------------------------------------
Listing wu-file(s) in /testWUs :
blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu

Listing executable(s) in /APPS :
MBv8_8.17r3516_NV_ssse3_x86_64-apple-darwin

Listing executable in /REF_APPs :
MBv8_8.05r3344_sse41_x86_64-apple-darwin
---------------------------------------------------
Current WU: blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu
---------------------------------------------------
Running default app with command : MBv8_8.05r3344_sse41_x86_64-apple-darwin
     4797.49 real      4788.79 user         7.25 sys
Elapsed Time: ………………………………… 4797 seconds
---------------------------------------------------
Running app with command : MBv8_8.17r3516_NV_ssse3_x86_64-apple-darwin
     1345.67 real       131.03 user       213.86 sys
Elapsed Time : ……………………………… 1346 seconds
Speed compared to default : 356 %
-----------------
Comparing results
                ------------- R1:R2 ------------     ------------- R2:R1 ------------
                Exact  Super  Tight  Good    Bad     Exact  Super  Tight  Good    Bad
        Spike      0      0      2      6      0        0      0      2      6      0
     Autocorr      0      0      0      0      0        0      0      0      0      0
     Gaussian      0      0      0      0      0        0      0      0      0      0
        Pulse      0      0      0      5      0        0      0      0      5      1
      Triplet      0      0      0      1      0        0      0      0      1      0
   Best Spike      0      0      1      1      0        0      0      1      1      0
Best Autocorr      0      0      0      0      1        0      0      0      0      1
Best Gaussian      1      1      1      1      0        1      1      1      1      0
   Best Pulse      0      0      0      1      0        0      0      0      1      0
 Best Triplet      0      0      0      1      0        0      0      0      1      0
                ----   ----   ----   ----   ----     ----   ----   ----   ----   ----
                   1      1      4     16      1        1      1      4     16      2

Unmatched signal(s) in R1 at line(s) 608
Unmatched signal(s) in R2 at line(s) 592 636
For R1:R2 matched signals only, Q= 19.24%
Result      : Weakly similar.
---------------------------------------------------

The Older x41p_zi which has been modified to use the Blocking Sync reducing CPU use;
Spike count:    6
Autocorr count: 0
Pulse count:    5
Triplet count:  1
Gaussian count: 0
Starting benchmark run...
---------------------------------------------------
Listing wu-file(s) in /testWUs :
blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu

Listing executable(s) in /APPS :
setiathome_x41p_zi_x86_64-apple-darwin_cuda75

Listing executable in /REF_APPs :
MBv8_8.05r3344_sse41_x86_64-apple-darwin
---------------------------------------------------
Current WU: blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu
---------------------------------------------------
Skipping default app MBv8_8.05r3344_sse41_x86_64-apple-darwin, displaying saved result(s)
Elapsed Time: ………………………………… 4797 seconds
---------------------------------------------------
Running app with command : setiathome_x41p_zi_x86_64-apple-darwin_cuda75
     1027.35 real       167.86 user        36.61 sys
Elapsed Time : ……………………………… 1027 seconds
Speed compared to default : 467 %
-----------------
Comparing results
Result      : Strongly similar,  Q= 99.37%
---------------------------------------------------

Not Bad...

Hmmm...
Spike count:    6
Autocorr count: 0
Pulse count:    5
Triplet count:  1
Gaussian count: 0
Starting benchmark run...
---------------------------------------------------
Listing wu-file(s) in /testWUs :
blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu

Listing executable(s) in /APPS :
setiathome_x41p_zi3e_x86_64-apple-darwin_cuda80

Listing executable in /REF_APPs :
MBv8_8.05r3344_sse41_x86_64-apple-darwin
---------------------------------------------------
Current WU: blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu
---------------------------------------------------
Skipping default app MBv8_8.05r3344_sse41_x86_64-apple-darwin, displaying saved result(s)
Elapsed Time: ………………………………… 4797 seconds
---------------------------------------------------
Running app with command : setiathome_x41p_zi3e_x86_64-apple-darwin_cuda80
      888.96 real       104.42 user        18.42 sys
Elapsed Time : ……………………………… 889 seconds
Speed compared to default : 539 %
-----------------
Comparing results
Result      : Strongly similar,  Q= 99.37%
---------------------------------------------------

Obviously one of the 50% or so of the current Alpha App tasks that validates on the first try.
The other 50% or so are usually off by One Pulse. Not this one though.

I'll have to see if I can round up a copy of the Stock OpenCL App and see how it does.
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Message 1813797 - Posted: 30 Aug 2016, 14:39:32 UTC
Last modified: 30 Aug 2016, 14:54:12 UTC

Well, I didn't have a handy link to the App on Main. I did have one to the App on Beta though;

Spike count:    6
Autocorr count: 0
Pulse count:    6
Triplet count:  1
Gaussian count: 0

Running on TomsMacPro.local at Tue Aug 30 14:02:54 2016
---------------------------------------------------
Starting benchmark run...
---------------------------------------------------
Listing wu-file(s) in /testWUs :
blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu

Listing executable(s) in /APPS :
setiathome_8.10_x86_64-apple-darwin__opencl_nvidia_mac

Listing executable in /REF_APPs :
MBv8_8.05r3344_sse41_x86_64-apple-darwin
---------------------------------------------------
Current WU: blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu
---------------------------------------------------
Skipping default app MBv8_8.05r3344_sse41_x86_64-apple-darwin, displaying saved result(s)
Elapsed Time: ………………………………… 4797 seconds
---------------------------------------------------
Running app with command : setiathome_8.10_x86_64-apple-darwin__opencl_nvidia_mac
     1444.76 real       117.24 user       257.14 sys
Elapsed Time : ……………………………… 1444 seconds
Speed compared to default : 332 %
-----------------
Comparing results
                ------------- R1:R2 ------------     ------------- R2:R1 ------------
                Exact  Super  Tight  Good    Bad     Exact  Super  Tight  Good    Bad
        Spike      0      0      2      6      0        0      0      2      6      0
     Autocorr      0      0      0      0      0        0      0      0      0      0
     Gaussian      0      0      0      0      0        0      0      0      0      0
        Pulse      0      0      0      5      0        0      0      0      5      1
      Triplet      0      0      0      1      0        0      0      0      1      0
   Best Spike      0      0      1      1      0        0      0      1      1      0
Best Autocorr      0      0      0      0      1        0      0      0      0      1
Best Gaussian      1      1      1      1      0        1      1      1      1      0
   Best Pulse      0      0      0      1      0        0      0      0      1      0
 Best Triplet      0      0      0      1      0        0      0      0      1      0
                ----   ----   ----   ----   ----     ----   ----   ----   ----   ----
                   1      1      4     16      1        1      1      4     16      2

Unmatched signal(s) in R1 at line(s) 608
Unmatched signal(s) in R2 at line(s) 592 636
For R1:R2 matched signals only, Q= 19.24%
Result      : Weakly similar.
---------------------------------------------------

Not much different than r3516...only slower.


I'm still pondering those Mac people at Beta. Running Apps that were released Apr 7th and don't stand a chance of making it to Main. Over and Over again. I don't think they are going to get any better. Too bad a few more of them aren't running the CUDA Apps, that actually give the correct results with the Current Mac OSX.

BTW, if there is something wrong with the Compiler Options used on the App at Beta, Why hasn't it been changed since Apr 7th?

Whatever.
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Message 1813870 - Posted: 30 Aug 2016, 18:43:32 UTC - in response to Message 1813767.  

I have archived another ~150 work units from both telescope sources. Feel free to download them and test. They are all located here, sorry for the folder structure of the drive, I'll try to make it tidier


Thank you!

I haven't looked at the data that can be found inside the link. But, I'm glad to announce that with the help of one of your WU's I've been able to find one bug and fix it!

As a developer I hope I can find a work unit and a valid result file (from standard CPU app) that I can compare against to.

I work the days, I have a family, I need to sleep, and I have this wonderful hobby :)

Petri
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Message 1813871 - Posted: 30 Aug 2016, 18:48:27 UTC
Last modified: 30 Aug 2016, 18:51:14 UTC

Hi,

and yes. One bug fixed. It was a typo. I had accidentally deleted a "+2" from a calculation that affected rounding with integers that define one limit for pulse finding in one of the three cases it runs (num_adds == 5).

TBar and jason_gee: please look at your emails.

Thanks for Gianfranco for a quick response and a quick compilation.

And since it is tuesday I'm waiting for the blackout. There was a short one, but that didn't last long. So where is the real outage?
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Message 1813897 - Posted: 30 Aug 2016, 19:45:35 UTC - in response to Message 1813871.  
Last modified: 30 Aug 2016, 19:45:52 UTC

updated in SVN, fingers crossed :). Guess the weekly outrage is late today ? Normally the project is offline at ~5am Wednesday morning for me, which is now.
"Living by the wisdom of computer science doesn't sound so bad after all. And unlike most advice, it's backed up by proofs." -- Algorithms to live by: The computer science of human decisions.
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Message 1813910 - Posted: 30 Aug 2016, 20:55:06 UTC - in response to Message 1813897.  

updated in SVN, fingers crossed :). Guess the weekly outrage is late today ? Normally the project is offline at ~5am Wednesday morning for me, which is now.



A some very many thank You Jason.
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Message 1813965 - Posted: 30 Aug 2016, 23:34:50 UTC - in response to Message 1813870.  

I have archived another ~150 work units from both telescope sources. Feel free to download them and test. They are all located here, sorry for the folder structure of the drive, I'll try to make it tidier


Thank you!

I haven't looked at the data that can be found inside the link. But, I'm glad to announce that with the help of one of your WU's I've been able to find one bug and fix it!

As a developer I hope I can find a work unit and a valid result file (from standard CPU app) that I can compare against to.

I work the days, I have a family, I need to sleep, and I have this wonderful hobby :)

Petri


Here is the datafile and [url]here [/url=https://drive.google.com/open?id=0B4Qsq1o-u3XpOHY3b1hDRGpJTkU]is its associated valid cpu result

Here is another datafile and cpu result file
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Message 1814020 - Posted: 31 Aug 2016, 2:29:14 UTC - in response to Message 1813910.  

Ran the test again with the New setiathome_x41p_zi3f_x86_64-apple-darwin_cuda80.
It seems to work about the same as the last version. I'll run it in BOINC now and see if it still misses a Pulse on about half the GUPPIs;

KWSN-Darwin-MBbench v2.1.07
Running on TomsMacPro.local at Wed Aug 31 00:28:44 2016
---------------------------------------------------
Starting benchmark run...
---------------------------------------------------
Listing wu-file(s) in /testWUs :
blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu

Listing executable(s) in /APPS :
setiathome_x41p_zi3e_x86_64-apple-darwin_cuda80 setiathome_x41p_zi3f_x86_64-apple-darwin_cuda80

Listing executable in /REF_APPs :
MBv8_8.05r3344_sse41_x86_64-apple-darwin
---------------------------------------------------
Current WU: blc2_2bit_guppi_57403_HIP11048_0006.17091.831.22.45.71.wu
---------------------------------------------------
Running default app with command : MBv8_8.05r3344_sse41_x86_64-apple-darwin
     5654.28 real      5619.47 user        25.87 sys
Elapsed Time: ………………………………… 5654 seconds
---------------------------------------------------
Running app with command : setiathome_x41p_zi3e_x86_64-apple-darwin_cuda80 -bs -unroll 4
      560.92 real        23.41 user        14.38 sys
Elapsed Time : ……………………………… 561 seconds
Speed compared to default : 1007 %
-----------------
Comparing results
Result      : Strongly similar,  Q= 99.37%
---------------------------------------------------
Running app with command : setiathome_x41p_zi3f_x86_64-apple-darwin_cuda80 -bs -unroll 4
      556.17 real        23.31 user        14.27 sys
Elapsed Time : ……………………………… 556 seconds
Speed compared to default : 1016 %
-----------------
Comparing results
Result      : Strongly similar,  Q= 99.37%
---------------------------------------------------

The last time the test was run without the cmdlines, this time the cmdlines were used.
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Message 1814066 - Posted: 31 Aug 2016, 5:45:56 UTC - in response to Message 1814020.  

Speed compared to default : 1016 %

Wow!
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Message 1814071 - Posted: 31 Aug 2016, 6:25:45 UTC

OK just uploaded another 100 WU from both telescopes
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Message 1814103 - Posted: 31 Aug 2016, 9:15:56 UTC - in response to Message 1814066.  

Speed compared to default : 1016 %

Wow!


Oh there's no doubt to me that Petri's work will make a massive mark. We manage to polish out the kinks, eventually a lot will trickle through to other devices/platforms as well.
"Living by the wisdom of computer science doesn't sound so bad after all. And unlike most advice, it's backed up by proofs." -- Algorithms to live by: The computer science of human decisions.
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Message 1814162 - Posted: 31 Aug 2016, 20:48:34 UTC - in response to Message 1813871.  

Hi,

and yes. One bug fixed. It was a typo. I had accidentally deleted a "+2" from a calculation that affected rounding with integers that define one limit for pulse finding in one of the three cases it runs (num_adds == 5).
...

Congratulations Petri.
That fix seems to have solved the major problems with the PulseFind. Very nice indeed!

Since that cleared out the Inconclusive list, it's now easy to find those random Autocorrelation errors.
I'm seeing them on both machines;
Linux, http://setiathome.berkeley.edu/result.php?resultid=5128516321
OSX, http://setiathome.berkeley.edu/result.php?resultid=5126683290
Fortunately they seem to be few in number.

Both machines seem to be much happier now.
Thanks.
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Message 1814165 - Posted: 31 Aug 2016, 20:54:14 UTC - in response to Message 1814162.  

Hi,

and yes. One bug fixed. It was a typo. I had accidentally deleted a "+2" from a calculation that affected rounding with integers that define one limit for pulse finding in one of the three cases it runs (num_adds == 5).
...

Congratulations Petri.
That fix seems to have solved the major problems with the PulseFind. Very nice indeed!

Since that cleared out the Inconclusive list, it's now easy to find those random Autocorrelation errors.
I'm seeing them on both machines;
Linux, http://setiathome.berkeley.edu/result.php?resultid=5128516321
OSX, http://setiathome.berkeley.edu/result.php?resultid=5126683290
Fortunately they seem to be few in number.

Both machines seem to be much happier now.
Thanks.


Thank you for testing. I'll be looking at the autocorr errors in weekend. I'd need a valid result file and the wu for those too.

Petri
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Message 1814192 - Posted: 31 Aug 2016, 23:01:10 UTC - in response to Message 1814165.  

Not sure what you want. But here is a datafile and results that I found had a few autocorr's in them
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Message 1814237 - Posted: 1 Sep 2016, 3:30:40 UTC - in response to Message 1814192.  

Not sure what you want. But here is a datafile and results that I found had a few autocorr's in them


Thank you Kiska,

probably just those. Haven't had time to look in yet.

I was referring to those that TBar found but I can do with your data too since thay have autocorr errors too.
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Kiska
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Message 1814268 - Posted: 1 Sep 2016, 7:06:50 UTC

Tbar, if you could, send me the datafile that has what petri has described and I'll run it on a stock Windows Intel app
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Message 1814295 - Posted: 1 Sep 2016, 9:41:37 UTC

I've just uploaded another ~100 WU for archiving, also on that note these WU do not have corresponding result files, I will try to generate them sometime soon
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Message 1814329 - Posted: 1 Sep 2016, 13:13:57 UTC - in response to Message 1814237.  
Last modified: 1 Sep 2016, 13:14:14 UTC

Not sure what you want. But here is a datafile and results that I found had a few autocorr's in them


Thank you Kiska,

probably just those. Haven't had time to look in yet.

I was referring to those that TBar found but I can do with your data too since thay have autocorr errors too.


@Kiska
Hi,

I downlaoded your WU and result file and I'm running a test on it now whth zi3f-version.

I'll get back when I have done a result file comparison.
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Message boards : Number crunching : Monitoring inconclusive GBT validations and harvesting data for testing


 
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